Description Usage Format Details
Each row corresponds to an observable antibody titre trajectory in the model. Columns are as follows:
1 |
An object of class "data.frame"
Unique identifier describing which group (G), exposure number (E) and exposure strain (S) this row corresponds to
Time in days of this exposure
If using type-specific parameters, which exposure type does this parameter correspond to? either infection, vacc or adj if 3 types, or infection1, infection2, vacc1, vacc2, adj1, adj2 if using 6 types.
f using exposure-strain specific interactions, which strain is in this exposure?
If using exposure-strain specific interactions, which observed strain are we currently describing?
Which number exposure is this, starting from 1 (ie. the nth exposure)
1 if this is a vaccination following priming infection, 0 otherwise
Which experimental group does this exposure correspond to?
At what time in days does the experimental protocol end?
Time at which the next exposure in this experimental group occurs
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