Description Usage Format Details
Parameter input table used to generate trajectories for a model with the following properties:
5 experimental groups
5 influenza strains being tracked (A-E)
Competitive interactions of multiple exposures
Antigenic seniority present
Type-specific cross reactivity parameters
Impact of priming infection subsequent vaccine response
6 distinct exposure types
Bi-phasic antibody waning
No titre-dependent boosting
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An object of class "data.frame"
Each row corresponds to a parameter in the model. Columns of the parameter table are as follows:
name of the parameter, see parameter_descriptions()
Which exposure ID does this parameter correspond to? This will be "all" for most model variants
Value of this parameter
If using type-specific parameters, which exposure type does this parameter correspond to? either infection, vacc or adj if 3 types, or infection1, infection2, vacc1, vacc2, adj1, adj2 if using 6 types.
f using exposure-strain specific interactions, which strain is in this exposure?
If using exposure-strain specific interactions, which observed strain are we currently describing?
only corresponds to the "mod" parameters, with 1 being first exposure and 4 being the 4th exposure
1 if this is a fixed parameter, 0 if to be estimated in the MCMC procedure
initial step size for the univariate MCMC sampler
lower allowable bound for this parameter
upper allowable bound for this parameter
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