jasenfinch/metaboWorkflows
Workflow Project Templates for Metabolomics Analyses

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Vignettes
Functions
202
Source code
29
Man pages
22
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jasenfinch/metaboWorkflows: Workflow Project Templates for Metabolomics Analyses
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API

API for jasenfinch/metaboWorkflows
Workflow Project Templates for Metabolomics Analyses

Global functions
%>% Man page
FilePathInput-class Man page
GCprofiling Source code
GroverInput-class Man page
LCprofiling Source code
Project-class Man page
Target-class Man page
args Man page
args,Target-method Man page
args<- Man page
args<-,Target-method Man page
assignmentParameters Source code
auth Man page
auth,GroverInput-method Man page
auth,Workflow-method Man page
auth<- Man page
auth<-,GroverInput-method Man page
auth<-,Workflow-method Man page
availableWorkflows Man page Source code
checkModule Source code
checkModuleDefinition Source code
checkTarget Source code
checkTargetDefinition Source code
checkWorkflow Source code
code Man page
code,Target-method Man page
command Man page
command,Target-method Man page
command<- Man page
command<-,Target-method Man page
comment Man page
comment,Target-method Man page
comment<- Man page
comment<-,Target-method Man page
correlationsTargets Source code
defineProject Man page Source code
defineWorkflow Man page
defineWorkflow,FilePathInput-method Man page
defineWorkflow,GroverInput-method Man page
directory Man page
directory,GroverInput-method Man page
directory,Workflow-method Man page
directory<- Man page
directory<-,GroverInput-method Man page
directory<-,Workflow-method Man page
docker Man page
docker,Project-method Man page
docker<- Man page
docker<-,Project-method Man page
dockerImage Source code
editHeader Source code
editTargetsScript Source code
filePaths Man page
filePaths,FilePathInput-method Man page
filePaths,Workflow-method Man page
filePaths<- Man page
filePaths<-,FilePathInput-method Man page
filePaths<-,Workflow-method Man page
fingerprintProcessing Source code
fingerprinting Source code
force Man page
force,Project-method Man page
force<- Man page
force<-,Project-method Man page
generateWorkflow Man page
generateWorkflow,Workflow-method Man page
github Man page
github,Project-method Man page
github<- Man page
github<-,Project-method Man page
githubActions Man page
githubActions,Project-method Man page
githubActions<- Man page
githubActions<-,Project-method Man page
glimpse Man page
glimpse,Workflow-method Man page
host Man page
host,GroverInput-method Man page
host,Workflow-method Man page
host<- Man page
host<-,GroverInput-method Man page
host<-,Workflow-method Man page
input Man page
input,Workflow-method Man page
input<- Man page
input<-,Workflow-method Man page
inputFilePath Man page Source code
inputGrover Man page Source code
instrument Man page
instrument,GroverInput-method Man page
instrument,Workflow-method Man page
instrument<- Man page
instrument<-,GroverInput-method Man page
instrument<-,Workflow-method Man page
isModule Source code
isTarget Source code
manifest Man page
manifest,Workflow-method Man page
modellingTargets Source code
moduleAdd Man page
moduleAdd,Workflow-method Man page
moduleReplace Man page
moduleReplace,Workflow-method Man page
moduleTargetsList Source code
modules Man page
modules,Workflow-method Man page
modulesKeep Man page
modulesKeep,Workflow-method Man page
modulesList Source code
modulesRemove Man page
modulesRemove,Workflow-method Man page
name Man page
name,Target-method Man page
name<- Man page
name<-,Target-method Man page
parallelOptions Source code
parallelPlan Man page
parallelPlan,Project-method Man page
parallelPlan<- Man page
parallelPlan<-,Project-method Man page
path Man page
path,Project-method Man page
path<- Man page
path<-,Project-method Man page
port Man page
port,GroverInput-method Man page
port,Workflow-method Man page
port<- Man page
port<-,GroverInput-method Man page
port<-,Workflow-method Man page
preTreatmentRoutine Source code
private Man page
private,Project-method Man page
private<- Man page
private<-,Project-method Man page
profilingParameters Source code
profilingProcessing Source code
projectName Man page
projectName,Project-method Man page
projectName<- Man page
projectName<-,Project-method Man page
readme Source code
reexports Man page
renv Man page
renv,Project-method Man page
renv<- Man page
renv<-,Project-method Man page
reportBody Source code
reportFooter Source code
reportHeader Source code
reportOptions Source code
sampleInformation Man page
sampleInformation,FilePathInput-method Man page
sampleInformation,Workflow-method Man page
sampleInformation<- Man page
sampleInformation<-,FilePathInput-method Man page
sampleInformation<-,Workflow-method Man page
scriptHeader Source code
target Man page
targetAdd Man page
targetAdd,Workflow-method Man page
targetRemove Man page
targetRemove,Workflow-method Man page
targetReplace Man page
targetReplace,Workflow-method Man page
targets Man page
targets,Workflow-method Man page
targets<- Man page
targets<-,Workflow-method Man page
targetsCorrelations Man page Source code
targetsInput Man page
targetsInput,FilePathInput-method Man page
targetsInput,GroverInput-method Man page
targetsInput,Workflow-method Man page
targetsList Source code
targetsMFassignment Man page Source code
targetsModelling Man page Source code
targetsOptions Source code
targetsPretreatment Man page Source code
targetsReport Man page Source code
targetsSpectralProcessing Man page Source code
targetsWorkflow Man page
targetsWorkflow,Workflow-method Man page
type Man page
type,Target-method Man page
type,Workflow-method Man page
type<- Man page
type<-,Target-method Man page
type<-,Workflow-method Man page
validate Man page
validate,Workflow-method Man page
writeTargets Source code
jasenfinch/metaboWorkflows documentation built on May 24, 2023, 8:23 a.m.

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