validate: Validate a workflow definition

In jasenfinch/metaboWorkflows: Workflow Project Templates for Metabolomics Analyses

Validate a workflow definition

Description

Validate a workflow definition, checking for issues. An error or a warning will be returned if a problem is detected.

Usage

validate(x)

## S4 method for signature 'Workflow'
validate(x)

Arguments

x	S4 object of class Workflow

Examples

file_paths <- metaboData::filePaths('FIE-HRMS','BdistachyonEcotypes')
sample_information <- metaboData::runinfo('FIE-HRMS','BdistachyonEcotypes')

workflow_input <- inputFilePath(file_paths,sample_information)

workflow_definition <- defineWorkflow(workflow_input,
                                      'FIE-HRMS fingerprinting',
                                      'Example project')
                 
validate(workflow_definition)

jasenfinch/metaboWorkflows documentation built on May 24, 2023, 8:23 a.m.