Files in jasonelaw/nrsa
Calculate metrics for NRSA protocol data.

.RDataTmp
.Rbuildignore
.gitattributes
.gitignore
DESCRIPTION
NAMESPACE
R/assignTaxCat.r R/calculateBankMorphology.r R/calculateCanopyCover.R R/calculateChannelChar.R R/calculateChannelHabitatProportions.r R/calculateChannelMorphology.R R/calculateFishCoverMeans.r R/calculateFishIBI.R R/calculateGeneral.r R/calculateHumanInfluence.r R/calculateInvasiveSpecies.r R/calculateLargeWoody.r R/calculateLittoralDepth.r R/calculateRelativeBedStability.R R/calculateResidualPools.R R/calculateRiparianVegetation.R R/calculateSlopeBearing.R R/calculateSubstrateEmbed.r R/calculateSubstrateMetrics.r R/convertNamedVectorToMetricDF.R R/fetchNRSATable.r R/first.R R/interpolatePercentile.r
R/is_element_of.R
R/meltMetrics.r R/modalCount.r R/nWadeableStationsPerTransect.r R/nrsa.options.r R/progressReport.r R/removeSideChannels.R R/revalueDataFrame.R R/sharedSupport.r R/siteProtocol.r
R/sysdata.rda
R/zzz.r README.md
data/CanopyDensiometer.expectedResults.Rdata
data/CanopyDensiometer.testData.Rdata
data/ChannelChar.expectedResults.Rdata
data/ChannelChar.testData.Rdata
data/ChannelConstraint.testData.Rdata
data/ChannelMorphology.BankGeometry.Rdata
data/ChannelMorphology.ExpectedResults.Rdata
data/ChannelMorphology.Protocol.Rdata
data/ChannelMorphology.Thalweg.Rdata
data/FishCover.expectedResults.Rdata
data/FishCover.testData.Rdata
data/HumanInfluence.expectedResults.Rdata
data/HumanInfluence.testData.Rdata
data/LargeWoody.expectedResults.Rdata
data/RiparianVegetation.expectedResults.Rdata
data/RiparianVegetation.testData.Rdata
data/SubstrateCharacterization.boatableLittoralSubstrate.Rdata
data/SubstrateCharacterization.boatableThalwegSubstrate.Rdata
data/SubstrateCharacterization.expectedResults.Rdata
data/SubstrateCharacterization.wadeableSubstrate.Rdata
inst/tests/data/CanopyDensiometer.expectedResults.Rdata
inst/tests/data/CanopyDensiometer.testData.Rdata
inst/tests/data/ChannelChar.expectedResults.Rdata
inst/tests/data/ChannelChar.testData.Rdata
inst/tests/data/ChannelConstraint.testData.Rdata
inst/tests/data/ChannelHabitat.expectedResults.Rdata
inst/tests/data/ChannelHabitat.testData.Rdata
inst/tests/data/ChannelMorphology.BankGeometry.Rdata
inst/tests/data/ChannelMorphology.ExpectedResults.Rdata
inst/tests/data/ChannelMorphology.Protocol.Rdata
inst/tests/data/ChannelMorphology.Thalweg.Rdata
inst/tests/data/ChannelMorphology.testData.Rdata
inst/tests/data/FishCover.expectedResults.Rdata
inst/tests/data/FishCover.testData.Rdata
inst/tests/data/HumanInfluence.expectedResults.Rdata
inst/tests/data/HumanInfluence.testData.Rdata
inst/tests/data/LargeWoody.bankwidData.Rdata
inst/tests/data/LargeWoody.expectedResults.Rdata
inst/tests/data/LargeWoody.protocolData.Rdata
inst/tests/data/LargeWoody.testData.Rdata
inst/tests/data/RelativeBedStability.expectedResults.Rdata
inst/tests/data/RelativeBedStability.testData.Rdata
inst/tests/data/RiparianVegetation.expectedResults.Rdata
inst/tests/data/RiparianVegetation.testData.Rdata
inst/tests/data/SlopeBearing.depthData.Rdata
inst/tests/data/SlopeBearing.expectedResults.Rdata
inst/tests/data/SlopeBearing.testData.Rdata
inst/tests/data/SubstrateCharacterization.boatableLittoralSubstrate.Rdata
inst/tests/data/SubstrateCharacterization.boatableThalwegSubstrate.Rdata
inst/tests/data/SubstrateCharacterization.expectedResults.Rdata
inst/tests/data/SubstrateCharacterization.wadeableSubstrate.Rdata
inst/tests/expect_metric_equal.R inst/tests/test-calculateCanopyCover.R inst/tests/test-calculateChannelChar.R inst/tests/test-calculateChannelHabitatProportions.R inst/tests/test-calculateChannelMorphology.R inst/tests/test-calculateFishIBI.R inst/tests/test-calculateLargeWoody.R inst/tests/test-calculateRelativeBedStability.R inst/tests/test-calculateResidualPools.R inst/tests/test-calculateRiparianVegetation.R inst/tests/test-calculateSlopeBearing.R inst/tests/test-calculateSubstrateMetrics.R man/WoodClassesData.Rd man/addWadeSubstrateSizes.Rd man/allCharToFac.Rd man/calcGrade.Rd man/calculateAngleMetrics.Rd man/calculateBankHardening.Rd man/calculateBoatAngleMetrics.Rd man/calculateBoatNumberWettedWidth.Rd man/calculateBoatThalwegSubstrateMetrics.Rd man/calculateBoatableReachLength.Rd man/calculateCanopyCover.Rd man/calculateChannelConstraint.Rd man/calculateChannelHabitatProportions.Rd man/calculateChannelMetrics.Rd man/calculateChannelMorphology.Rd man/calculateDistanceAlongThalweg.Rd man/calculateFishCover.Rd man/calculateFishIBI.Rd man/calculateHIWeightedSums.Rd man/calculateHumanInfluence.Rd man/calculateHumanInfluenceSD.Rd man/calculateInvasiveScore.Rd man/calculateLWDCountMetrics.Rd man/calculateLWDCumulativeMetrics.Rd man/calculateLWDSiteArea.Rd man/calculateLWDSiteLength.Rd man/calculateLittoralDepth.Rd man/calculatePercentSideChannel.Rd man/calculatePool.Rd man/calculatePoolMetrics.Rd man/calculatePropTranInvPresent.Rd man/calculateProportionSeeOverBank.Rd man/calculateRefinedCriticalDiameter.Rd man/calculateRelativeBedStability.Rd man/calculateRiparianVegetation.Rd man/calculateS_RP100.Rd man/calculateShoreToVegDistance.Rd man/calculateSideChannelCount.Rd man/calculateSubstrateEmbed.Rd man/calculateThalwegDepthMetrics.Rd man/calculateThalwegRatios.Rd man/calculateTransectRatios.Rd man/calculateWadeBankMetrics.Rd man/calculateWadeSubstrateMetrics.Rd man/calculateWadeableReachLength.Rd man/calculateWettedWidthMetrics.Rd man/convertFactorToNumeric.Rd man/convertNamedVectorToMetricDF.Rd man/coordinatesFromTraverse.Rd man/count.notna.Rd man/fillMissingLWD.Rd man/first.Rd man/fixBoatableDepthUnits.Rd man/forceSlopeGt0.Rd man/formatFishCover.Rd man/formatRiparianVegetation.Rd man/getAngleFromDisplacement.Rd man/getChannelConstraint.Rd man/getPoolInformation.Rd man/gmean.Rd man/grapes-and-grapes.Rd man/identifyIncompleteSites.Rd man/idr.Rd man/iqr.Rd man/is.subset.Rd man/isSiteSampled.Rd man/joinExtraTransects.Rd man/lag.Rd man/meltMetrics.Rd man/modalClass.Rd man/modalvalue.Rd man/nWadeableStations.Rd man/nrsa-package.Rd man/nrsa.options.Rd man/observedLWDTransects.Rd man/p2pDistance.Rd man/progressReport.Rd man/removeSideChannels.Rd man/renameHumanInfluenceMetrics.Rd man/rescaleMetrics.Rd man/residualDepth.Rd man/rowSumsProtectNA.Rd man/which.is.max.Rd
nrsa.Rproj
tests/testSuiteNRSA.r
jasonelaw/nrsa documentation built on Aug. 13, 2018, 6:56 a.m.