Files in jayaraman-lab/neuprintrExtra

Extra functions to analyze neuprint EM datasets

R/connectionTables.R R/connectivityCluster.R R/connectivityMatrices.R R/cxtools.R R/neuprintrExtra-package.R R/neuron2polygon.R R/neuronBag.R R/plotting.R R/retyping.R R/rois.R R/supertypeUtils.R R/typesPathways.R R/utils.R R/zzz.R README.md man/addContraSide.Rd man/combineRois.Rd man/connectivityCluster.Rd man/connectivityMatrix.Rd man/cos_dist.Rd man/cxRetyping.Rd man/filter.neuronBag.Rd man/getConnectionTable.Rd man/getIntraBag.Rd man/getMeta.Rd man/getNeuronsInRoiTable.Rd man/getROISummary.Rd man/getRoiInfo.Rd man/getRoiTree.Rd man/getTypeToTypeTable.Rd man/getTypesInRoiTable.Rd man/getTypesTable.Rd man/get_col_name.Rd man/get_type2typePath.Rd man/haneschPlot.Rd man/is.connectivityCluster.Rd man/is.neuronBag.Rd man/lateralize_types.Rd man/neuprintrExtra-package.Rd man/neuron2polygon.Rd man/neuronBag.Rd man/pathDf2graphDf.Rd man/plotClusters.Rd man/plotConnectivity.Rd man/processConnectionTable.Rd man/redefineTypeByBodyId.Rd man/redefineTypeByName.Rd man/redefine_types.Rd man/retype.na.Rd man/roiOutline.Rd man/roisPalette.Rd man/scale_color_CX_supertype.Rd man/scale_fill_CX_supertype.Rd man/selectRoiSet.Rd man/selectSupertypeSet.Rd man/setClusters.Rd man/simplifyConnectionTable.Rd man/supertype.Rd man/supertype2Palette.Rd man/tableChain2path.Rd man/tables2path.Rd man/typesInROI.Rd man/typesPalette.Rd tests/testthat.R tests/testthat/test-neuronBag.R tests/testthat/test-rois.R tests/testthat/test-typePathways.R