cxRetyping: Convenience function to do all the CX neurons renaming

Description Usage Arguments Details

View source: R/cxtools.R

Description

Convenience function to do all the CX neurons renaming

Usage

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cxRetyping(
  connections,
  redefinePartners = TRUE,
  postfix = c("raw", "to", "from"),
  verbose = FALSE
)

Arguments

connections

Connectivity table or neuronBag to modify

redefinePartners

If table is a neuronBag, should the partners also be retyped?

postfix

One of "raw, "to" or "from". Specify if type (and name) columns in table to be modified are postfixed with to and from or nothing

verbose

Should messages about progress be displayed

Details

PFL1,3 and PFR_a and _b are renamed so that the outputs of a subtype go to the same region. All others are renamed L/R


jayaraman-lab/neuprintrExtra documentation built on Dec. 20, 2021, 10 p.m.