get_SSpath: defines path for the spectral species raster file. Depends on...

In jbferet/biodivMapR: biodivMapR: an R package for a- and ß-diversity mapping using remotely-sensed images

defines path for the spectral species raster file. Depends on preprocessing: - if standard dimensionality reduction (PCA, SPCA, MNF) was used, the corresponding directory is pointed - if no dimensionality reduction, or an alternative dimensionality reduction (spectral indices, tasseled cap... ) was used, user defined subdirectory is used - Diversity metrics can also be computed from a classification map

Description

defines path for the spectral species raster file. Depends on preprocessing: - if standard dimensionality reduction (PCA, SPCA, MNF) was used, the corresponding directory is pointed - if no dimensionality reduction, or an alternative dimensionality reduction (spectral indices, tasseled cap... ) was used, user defined subdirectory is used - Diversity metrics can also be computed from a classification map

Usage

get_SSpath(Output_Dir, Input_Image_File, TypePCA, ClassifMap, nbclusters)

Arguments

Output_Dir	character. Output directory.
Input_Image_File	character. Path and name of the image to be processed.
TypePCA	character. Type of PCA (PCA, SPCA, NLPCA...).
ClassifMap	character. If FALSE, perform standard biodivMapR based on SpectralSpecies. else corresponds to path for a classification map.
nbclusters	numeric. number of clusters (possibly updated)

Value

list. includes Spectral_Species_Path

jbferet/biodivMapR documentation built on April 25, 2024, 10:44 p.m.