Man pages for jbisanz/qiime2R
qiime2R

interactive_tableDisplay an interactive table
is_q2metadatachecks if metadata is in qiime2 (.tsv)
make_clrNormalization Functions
parse_ordinationParse an imported q2 ordination text file
parse_taxonomyParse Q2 taxonomy
print_provenanceplot the provenance of a QIIME2 artifact (.qza)
qza_to_phyloseqgenerates a phyloseq object from .qza artifacts
read_q2biomread qiime2 biom file (version 2.1)
read_q2metadataread qiime2 metadata (.tsv)
read_qzaread qiime2 artifacts (.qza)
summarize_taxasummarize_taxa
taxa_barplottaxa_barplot
taxa_heatmaptaxa_heatmap
theme_q2rA ggplot2 theme for publication-style figures
write_q2manifestGenerates a read manifest for importing sequencing data into...
jbisanz/qiime2R documentation built on June 26, 2020, 4:31 p.m.