read_q2biom: read qiime2 biom file (version 2.1)

View source: R/read_q2biom.R

read_q2biomR Documentation

read qiime2 biom file (version 2.1)

Description

Loads a version 2.1 spec biom file (http://biom-format.org/documentation/format_versions/biom-2.1.html) as expected to be found within a qiime2 artifact.

Usage

read_q2biom(file)

Arguments

file

path to the input file, ex: file="~/Downloads/3372d9e0-3f1c-43d8-838b-35c7ad6dac89/data/feature-table.biom"

Value

a matrix of values

Examples

## Not run: metadata<-read_q2biom("feature-table.biom")

jbisanz/qiime2R documentation built on March 19, 2024, 12:41 p.m.