parse_ordination: Parse an imported q2 ordination text file
In jbisanz/qiime2R: qiime2R
View source: R/parse_ordination.R
parse_ordination R Documentation
Parse an imported q2 ordination text file
Description
Parse an imported q2 ordination text file
Usage
parse_ordination(artifact, tmp)
Arguments
artifact
takes an artifact containing the unparsed ordination format (result of readLines)
tmp
the tmp dir for artifact
Value
a data.frame with feature IDs as row names and the columns: Kingdom, Phylum, Class, Order, Family, Genus, Species
Examples
## Not run: ord<-parse_ordination(ordination_artifact, tmpdir)
jbisanz/qiime2R documentation built on Dec. 17, 2024, 4:09 p.m.
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View source: R/parse_ordination.R
| parse_ordination | R Documentation |
Parse an imported q2 ordination text file
Description
Parse an imported q2 ordination text file
Usage
parse_ordination(artifact, tmp)
Arguments
artifact |
takes an artifact containing the unparsed ordination format (result of readLines) |
tmp |
the tmp dir for artifact |
Value
a data.frame with feature IDs as row names and the columns: Kingdom, Phylum, Class, Order, Family, Genus, Species
Examples
## Not run: ord<-parse_ordination(ordination_artifact, tmpdir)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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