parse_ordination: Parse an imported q2 ordination text file
In jbisanz/qiime2R: qiime2R
Description
Usage
Arguments
Value
Examples
View source: R/parse_ordination.R
Description
Parse an imported q2 ordination text file
Usage
1
parse_ordination(artifact, tmp)
Arguments
artifact
takes an artifact containing the unparsed ordination format (result of readLines)
tmp
the tmp dir for artifact
Value
a data.frame with feature IDs as row names and the columns: Kingdom, Phylum, Class, Order, Family, Genus, Species
Examples
1
## Not run: ord<-parse_ordination(ordination_artifact, tmpdir)
jbisanz/qiime2R documentation built on Nov. 12, 2021, 3:09 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
View source: R/parse_ordination.R
Description
Parse an imported q2 ordination text file
Usage
1 | parse_ordination(artifact, tmp)
|
Arguments
artifact |
takes an artifact containing the unparsed ordination format (result of readLines) |
tmp |
the tmp dir for artifact |
Value
a data.frame with feature IDs as row names and the columns: Kingdom, Phylum, Class, Order, Family, Genus, Species
Examples
1 | ## Not run: ord<-parse_ordination(ordination_artifact, tmpdir)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.