gmt2Gmat: Transform list from GMT into feature-by-pathway matrix

Description Usage Arguments Value

View source: R/gmt2Gmat.R

Description

Transform list from reading in GMT using ezlimma::read_gmt into feature-by-pathway matrix.

Usage

1
gmt2Gmat(gmt.lst)

Arguments

gmt.lst

List returned by read_gmt.

Value

A binary Matrix of features (e.g. proteins) as rows and pathways as columns, indicating pathway membership.


jdreyf/PANTS documentation built on July 18, 2019, 10:12 a.m.