API for jeffkimbrel/MappgeneSummary
Summarize Mappgene SNV Data
| Global functions | |
|---|---|
| add_SNV | Man page Source code |
| add_zika_reference | Man page Source code |
| copy_summary_template | Man page Source code |
| example_df_A_ivar | Man page |
| example_df_A_lofreq | Man page |
| example_df_B_ivar | Man page |
| example_df_B_lofreq | Man page |
| example_df_C_ivar | Man page |
| example_df_C_lofreq | Man page |
| get_country_outbreak_info | Man page Source code |
| get_coverages | Man page Source code |
| get_global_outbreak_info | Man page Source code |
| get_outbreak_info | Man page Source code |
| get_outbreak_latest | Man page Source code |
| get_outbreak_peak | Man page Source code |
| get_outbreak_start | Man page Source code |
| get_state_outbreak_info | Man page Source code |
| gini_simpson | Man page Source code |
| hill_12I | Man page Source code |
| make_venn | Man page Source code |
| parse_ref_alt | Man page Source code |
| plot_coverage_ecdf | Man page Source code |
| plot_effect_counts | Man page Source code |
| plot_heatmap | Man page Source code |
| plot_nmds | Man page Source code |
| plot_outbreak_milestones | Man page Source code |
| plot_outbreak_trends | Man page Source code |
| read_mappgene_data | Man page Source code |
| simpson | Man page Source code |
| view_HGVS_C | Man page Source code |
| zika_reference | Man page |
