plot_nmds: Plot NMDS of AF values
In jeffkimbrel/MappgeneSummary: Summarize Mappgene SNV Data
plot_nmds R Documentation
Plot NMDS of AF values
Description
If you don't get convergent, try changing the seed with set.seed()
Usage
plot_nmds(df, points = "SAMPLE", species = "SNV", distance = "bray")
Arguments
df
Dataframe or tibble
points
The main values to ordinate
species
The secondary values to order the points with
distance
A distance method
jeffkimbrel/MappgeneSummary documentation built on Dec. 24, 2024, 3:12 p.m.
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| plot_nmds | R Documentation |
Plot NMDS of AF values
Description
If you don't get convergent, try changing the seed with set.seed()
Usage
plot_nmds(df, points = "SAMPLE", species = "SNV", distance = "bray")
Arguments
df |
Dataframe or tibble |
points |
The main values to ordinate |
species |
The secondary values to order the points with |
distance |
A distance method |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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