plot_outbreak_milestones: Get the first, peak and most recent times and plots for a...

In jeffkimbrel/MappgeneSummary: Summarize Mappgene SNV Data

Get the first, peak and most recent times and plots for a list of mutations

Description

Get the first, peak and most recent times and plots for a list of mutations

Usage

plot_outbreak_milestones(
  df,
  snv_list,
  ncol = 2,
  min.date = NA,
  max.date = NA,
  colors = c(),
  line_width = 1,
  line_alpha = 0.8
)

Arguments

df	A tibble or dataframe from get_outbreak_info
snv_list	A list of the SNVs
ncol	The number of columns to facet the plots
min.date	Filter the df to only include dates later than or equal to this date (YYYY-MM-DD)
max.date	Filter the df to only include dates earlier than or equal to this date (YYYY-MM-DD)

jeffkimbrel/MappgeneSummary documentation built on Dec. 24, 2024, 3:12 p.m.