Files in jgockley62/igraphNetworkExpansion
Trace Subnetworks from an AD Necortical Network of Protein-Protein Interactions
.DS_Store
.Rbuildignore
.Rhistory
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/pkgdown.yaml
.gitignore
.gitmodules
DESCRIPTION
LICENSE
NAMESPACE
R/data.R
R/functions.R
R/igraphplot2.R
README.md
_pkgdown.yml
data/.DS_Store
data/basic_network.rda
data/basic_network_interactions.rda
data/basic_network_table.rda
data/genelists.rda
data/sample_network.rda
data/slim_net.rda
inst/.DS_Store
inst/extdata/.DS_Store
inst/extdata/inputlists/APP_Metabolism.txt
inst/extdata/inputlists/Endolysosomal.txt
inst/extdata/inputlists/Epigenetic_Regulation.txt
inst/extdata/inputlists/Immune_Response.txt
inst/extdata/inputlists/Lipid_Metabolism.txt
inst/extdata/inputlists/Mitochondria_Metabolism.txt
inst/extdata/inputlists/Myelination.txt
inst/extdata/inputlists/Oxidative_Stress.txt
inst/extdata/inputlists/RNA_Spliceosome.txt
inst/extdata/inputlists/Regulation_of_Apoptosis.txt
inst/extdata/inputlists/Structural_Stabilization.txt
inst/extdata/inputlists/Synaptic_Dysfunction.txt
inst/extdata/inputlists/Tau_Homeostasis.txt
inst/extdata/inputlists/Vascular_Function.txt
man/base_net_ppi.Rd
man/basic_network.Rd
man/basic_network_interactions.Rd
man/basic_network_table.Rd
man/derived_net_ppi.Rd
man/find_limit.Rd
man/genelists.Rd
man/list_load.Rd
man/log_into_synapse.Rd
man/name_pull.Rd
man/network_load.Rd
man/path_calc.Rd
man/path_filter.Rd
man/path_obj_filter.Rd
man/plot.igraph2.Rd
man/plot_enrich.Rd
man/ppi_enrichment.Rd
man/rm_dups.Rd
man/sample_network.Rd
man/short_paths.Rd
man/sif_boot.Rd
man/sif_loader.Rd
man/slim_net.Rd
man/store_net.Rd
man/table_pull.Rd
man/trace_filter.Rd
man/vertex_annotate.Rd
tests/.DS_Store
tests/testthat.R
tests/testthat/test-list_load.R
tests/testthat/test-test-find_limit.R
tests/testthat/test-test-name_pull.R
tests/testthat/test-test-path_calc.R
tests/testthat/test-test-path_filter.R
tests/testthat/test-test-path_obj_filter.R
tests/testthat/test-test-short_paths.R
tests/testthat/test-test-trace_filter.R
vignettes/.gitignore
vignettes/Vignette_01_Base_Network_Assembally.Rmd
