plot_enrich: Plot PPI Enrichment

In jgockley62/igraphNetworkExpansion: Trace Subnetworks from an AD Necortical Network of Protein-Protein Interactions

Plot PPI Enrichment

Description

Takes PPI enrichment object from 'ppi_enrichment' and plots it with either scaled or non-scaled values

Usage

plot_enrich(enrich_obj, scaled = "NO")

Arguments

enrich_obj	enrichment object from 'ppi_enrichment'
scaled	Scale the fold change by filter methods of each tissue default No. Values accepted; YES or NO

Examples

## Not run: 
data(basic_network)
base <- base_net_ppi( 
 i_net = basic_network, 
 vect =c( 'Brain', 'Heart', 'Kidney', 'Liver',
    'Lung', 'Muscle', 'Thymus'
  ) 
)
derived <- derived_net_ppi( 
 i_net = list(basic_network), 
 vect =c( 'Brain', 'Heart', 'Kidney', 'Liver',
    'Lung', 'Muscle', 'Thymus'
  ) 
)
ppi_enrichment(base=base, derived=derived)
plot_enrich(ppi_enrichment)

## End(Not run)

jgockley62/igraphNetworkExpansion documentation built on April 15, 2022, 12:14 a.m.