ppi_enrichment: PPI Enrichment

In jgockley62/igraphNetworkExpansion: Trace Subnetworks from an AD Necortical Network of Protein-Protein Interactions

PPI Enrichment

Description

Takes inputs of base network stats from 'base_net_ppi' in the form of a list and derived network stats from 'derived_net_ppi' in the form of a list of lists.

Usage

ppi_enrichment(base, derived)

Arguments

base	The Base Enrichment Network Stats from 'base_net_ppi'
derived	The Derived Enrichment Network Stats from 'derived_net_ppi'

Examples

## Not run: 
data(basic_network)
base <- base_net_ppi( 
 i_net = basic_network, 
 vect =c( 'Brain', 'Heart', 'Kidney', 'Liver',
    'Lung', 'Muscle', 'Thymus'
  ) 
)
derived <- derived_net_ppi( 
 i_net = list(basic_network), 
 vect =c( 'Brain', 'Heart', 'Kidney', 'Liver',
    'Lung', 'Muscle', 'Thymus'
  ) 
)
ppi_enrichment(base=base, derived=derived)

## End(Not run)

jgockley62/igraphNetworkExpansion documentation built on April 15, 2022, 12:14 a.m.