GeneNetworkBuilder-package: Build Regulatory Network from ChIP-chip/ChIP-seq and...

In jianhong/GeneNetworkBuilder: GeneNetworkBuilder: a bioconductor package for building regulatory network using ChIP-chip/ChIP-seq data and Gene Expression Data

Build Regulatory Network from ChIP-chip/ChIP-seq and Expression Data

Description

Appliation for discovering direct or indirect targets of transcription factors using ChIP-chip or ChIP-seq, and microarray or RNA-seq gene expression data. Inputting a list of genes of potential targets of one TF from ChIP-chip or ChIP-seq, and the gene expression results, GeneNetworkBuilder generates a regulatory network of the TF.

Author(s)

Maintainer: Jianhong Ou Developer [e-mail]

Authors:

• Lihua Julie Zhu Developer [e-mail]

jianhong/GeneNetworkBuilder documentation built on Oct. 26, 2023, 3:45 a.m.