motifSig-class: Class '"motifSig"'

motifSig-classR Documentation

Class "motifSig"

Description

An object of class "motifSig" represents the output of function motifSignature

methods for motifSig objects.

Usage

signatures(object)

frequence(object)

nodelist(object)

sigColor(object)

## S4 method for signature 'motifSig'
x$name

Arguments

object

An object of class motifSig.

x

A motifSig object

name

slot name of motifSig object

Objects from the Class

Objects can be created by calls of the form new("motifSig", signature, freq, nodelist, gpcol).

Methods

signatures

signature(object = "motifSig") return the signatures of motifSig

frequence

signature(object = "motifSig") return the frequency of motifSig

nodelist

signature(object = "motifSig") return the nodelist of motifSig

sigColor

signature(object = "motifSig") return the group color sets of motifSig

$, $<-

Get or set the slot of motifSig


jianhong/motifStack documentation built on Nov. 5, 2024, 7:47 a.m.