jianhong/motifStack: Plot stacked logos for single or multiple DNA, RNA and amino acid sequence

The motifStack package is designed for graphic representation of multiple motifs with different similarity scores. It works with both DNA/RNA sequence motif and amino acid sequence motif. In addition, it provides the flexibility for users to customize the graphic parameters such as the font type and symbol colors.

Getting started

Package details

AuthorJianhong Ou, Michael Brodsky, Scot Wolfe and Lihua Julie Zhu
Bioconductor views Alignment ChIPSeq ChIPchip DataImport Microarray MotifAnnotation SequenceMatching Sequencing Visualization
MaintainerJianhong Ou <jianhong.ou@duke.edu>
LicenseGPL (>= 2)
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
jianhong/motifStack documentation built on April 28, 2023, 7:57 a.m.