jianhong/ribosomeProfilingQC: Ribosome Profiling Quality Control

Ribo-Seq (also named ribosome profiling or footprinting) measures translatome (unlike RNA-Seq, which sequences the transcriptome) by direct quantification of the ribosome-protected fragments (RPFs). This package provides the tools for quality assessment of ribosome profiling. In addition, it can preprocess Ribo-Seq data for subsequent differential analysis.

Getting started

Package details

Bioconductor views Coverage GeneRegulation QualityControl RiboSeq Sequencing Visualization
LicenseGPL (>=3) + file LICENSE
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
jianhong/ribosomeProfilingQC documentation built on April 19, 2021, 2:16 a.m.