deleteTips: Remove tips from a phylogenetic Network
In jjustison/SiPhyNetwork: A Phylogenetic Simulator for Reticulate Evolution
deleteTips R Documentation
Remove tips from a phylogenetic Network
Description
This function removes certain tips from a phylogenetic network, returning the pruned network.
Usage
deleteTips(net, tips)
Arguments
net
An object of class 'evonet.'
tips
A numeric vector specifying the tip numbers to delete
Value
net The network tips removed.
Examples
set.seed(17) ##Set seed with smallest Quartran Prime
net<-sim.bdh.age(1,1,5,2,1,c(1/3,1/3,1/3),hyb.inher.fxn = make.uniform.draw(),complete=FALSE)[[1]]
net<- deleteTips(net,c(1,6)) ##drop tips 1 and 6
jjustison/SiPhyNetwork documentation built on Sept. 14, 2024, 8:58 a.m.
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| deleteTips | R Documentation |
Remove tips from a phylogenetic Network
Description
This function removes certain tips from a phylogenetic network, returning the pruned network.
Usage
deleteTips(net, tips)
Arguments
net |
An object of class 'evonet.' |
tips |
A numeric vector specifying the tip numbers to delete |
Value
net The network tips removed.
Examples
set.seed(17) ##Set seed with smallest Quartran Prime
net<-sim.bdh.age(1,1,5,2,1,c(1/3,1/3,1/3),hyb.inher.fxn = make.uniform.draw(),complete=FALSE)[[1]]
net<- deleteTips(net,c(1,6)) ##drop tips 1 and 6
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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