API for jjustison/SiPhyNetwork
A Phylogenetic Simulator for Reticulate Evolution
| Global functions | |
|---|---|
| .w.tree2 | Source code |
| as.evonet.phylo2 | Source code |
| biconnectedComponents | Man page Source code |
| chckLbl | Source code |
| deleteTips | Man page Source code |
| e2p | Source code |
| get.extinct | Source code |
| getEffectiveN | Source code |
| getNetworkLevel | Man page Source code |
| getReconstructedTips | Source code |
| getSamplingTips | Source code |
| handleTipsTaxa | Source code |
| incompleteSampling | Man page Source code |
| internal.network.gsa | Source code |
| internalTimeSliceNetwork | Source code |
| isFUstable | Man page Source code |
| isNormal | Man page Source code |
| isTreeBased | Man page Source code |
| isTreeChild | Man page Source code |
| ltt.network | Man page Source code |
| make.beta.draw | Man page Source code |
| make.categorical.draw | Man page Source code |
| make.exp.decay | Man page Source code |
| make.linear.decay | Man page Source code |
| make.polynomial.decay | Man page Source code |
| make.stepwise | Man page Source code |
| make.trait.model | Man page Source code |
| make.uniform.draw | Man page Source code |
| network.gsa | Man page Source code |
| plottable.net | Man page Source code |
| read.net | Man page Source code |
| read.tree2 | Source code |
| reconstructedNetwork | Man page Source code |
| sim.bdh.age | Man page Source code |
| sim.bdh.age.help | Source code |
| sim.bdh.age.loop | Source code |
| sim.bdh.taxa.gsa | Man page Source code |
| sim.bdh.taxa.gsa.help | Source code |
| sim.bdh.taxa.ssa | Man page Source code |
| sim.bdh.taxa.ssa.help | Source code |
| sim2.bdh.origin | Source code |
| timeSliceNetwork | Source code |
| tree.build2 | Source code |
| vcv_net | Source code |
| w.tree | Source code |
| write.net | Man page Source code |
