BOOTmodel: Bootstrap analysis with the best model

In jlab-code/AlphaBeta: Computational inference of epimutation rates and spectra from high-throughput DNA methylation data in plants

Bootstrap analysis with the best model

Description

Bootstrap analysis with the best model

Usage

BOOTmodel(pedigree.data, Nboot, out.dir, out.name)

Arguments

pedigree.data	pedigree data.
Nboot	number of boot.
out.dir	output directory.
out.name	output file name.

Value

bootstrap result.

Examples

## Get some toy data
inFile <- system.file("extdata/models/","ABneutral_CG_global_estimates.Rdata", package="AlphaBeta")
Nboot <- 4
out.name <-"Boot_CG_global_estimates_ABneutral"
Bout <- BOOTmodel(pedigree.data=inFile,
                Nboot=Nboot,
                out.dir=getwd(),
                out.name=out.name)
summary(Bout)

jlab-code/AlphaBeta documentation built on April 23, 2022, 11:02 a.m.