addGenome: Add your own Genome
In jlaffy/infercna: Infer Copy Number Alterations And Clonality In (Single-Cell) RNA-seq Data
addGenome R Documentation
Add your own Genome
Description
Add your own Genome for infercna to use. The
Usage
addGenome(genome, name = "userDefined")
Arguments
genome
genome data provided as a dataframe. The dataframe should contain columns 'symbol', 'start_position', 'end_position', 'chromosome_name', 'arm'. The columns 'chromosome_name' and 'arm' should be factors, with the chromosome/chromosome arms ordered correctly.
name
a character string; the name of your genome. Default: 'userDefined'
Value
no return value. The genome variables will be updated internally.
jlaffy/infercna documentation built on Jan. 26, 2024, 11:24 p.m.
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| addGenome | R Documentation |
Add your own Genome
Description
Add your own Genome for infercna to use. The
Usage
addGenome(genome, name = "userDefined")
Arguments
genome |
genome data provided as a dataframe. The dataframe should contain columns 'symbol', 'start_position', 'end_position', 'chromosome_name', 'arm'. The columns 'chromosome_name' and 'arm' should be factors, with the chromosome/chromosome arms ordered correctly. |
name |
a character string; the name of your genome. Default: 'userDefined' |
Value
no return value. The genome variables will be updated internally.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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