save_salmon_qc_xlsx: Save Salmon QC to Xlsx

In jmw86069/platjam: Platform Jam, biological platform importers.

Save Salmon QC to Xlsx

Description

Save Salmon QC to Xlsx

Usage

save_salmon_qc_xlsx(
  metajsons,
  salmon_qc_xlsx = NULL,
  adj_target_reads = 7.5e+07,
  verbose = FALSE,
  ...
)

Arguments

metajsons	data.frame output from get_salmon_meta()
salmon_qc_xlsx	character path to file to be saved.
adj_target_reads	numeric number indicating the target number of sequence reads per row, used to define color gradient range.
verbose	logical indicating whether to print verbose output.
...	additional arguments are passed to underlying functions.

See Also

Other jam nextgen sequence functions: get_salmon_meta(), get_salmon_root(), parse_salmon_flenfile()

jmw86069/platjam documentation built on Sept. 26, 2024, 3:31 p.m.