joey711/phyloseq: Handling and analysis of high-throughput microbiome census data

phyloseq provides a set of classes and tools to facilitate the import, storage, analysis, and graphical display of microbiome census data.

Getting started

Package details

AuthorPaul J. McMurdie <joey711@gmail.com>, Susan Holmes <susan@stat.stanford.edu>, with contributions from Gregory Jordan and Scott Chamberlain
Bioconductor views Classification Clustering GeneticVariability ImmunoOncology Metagenomics Microbiome MultipleComparison Sequencing
MaintainerPaul J. McMurdie <joey711@gmail.com>
LicenseAGPL-3
Version1.41.1
URL http://dx.plos.org/10.1371/journal.pone.0061217
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("joey711/phyloseq")
joey711/phyloseq documentation built on Nov. 4, 2022, 1:16 a.m.