Files in jokergoo/circlize
Circular Visualization

.Rbuildignore

.github/.gitignore

.github/ISSUE_TEMPLATE/getting-help.md

.github/workflows/R-CMD-check.yaml

.gitignore

CODE_OF_CONDUCT.md

DESCRIPTION

LICENSE

NAMESPACE

NEWS

R/chordDiagram.R R/circos.arrow.R R/circos.heatmap.R R/circos.nested.R R/genomic.R R/genomic_utils.R R/global.R R/link.R R/low_level.R R/overview.R R/plot.R R/random_color.R R/raster.R R/regions.R R/utils.R R/zzz.R README.md

_pkgdown.yml

build_pkg_site.R

codecov.yml

demo/00Index

demo/foo.R

docs/404.html

docs/LICENSE-text.html

docs/articles/circlize.html

docs/articles/circlize_files/accessible-code-block-0.0.1/empty-anchor.js

docs/articles/circlize_files/header-attrs-2.1/header-attrs.js

docs/articles/circlize_files/header-attrs-2.2/header-attrs.js

docs/articles/circlize_files/header-attrs-2.3/header-attrs.js

docs/articles/index.html

docs/authors.html

docs/bootstrap-toc.css

docs/bootstrap-toc.js

docs/docsearch.css

docs/docsearch.js

docs/index.html

docs/link.svg

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/CELL_META.html

docs/reference/Subset.CELL_META.html

docs/reference/add_transparency.html

docs/reference/adjacencyList2Matrix.html

docs/reference/adjacencyMatrix2List.html

docs/reference/calc_gap-1.png

docs/reference/calc_gap-2.png

docs/reference/calc_gap.html

docs/reference/chordDiagram-1.png

docs/reference/chordDiagram-2.png

docs/reference/chordDiagram.html

docs/reference/chordDiagramFromDataFrame.html

docs/reference/chordDiagramFromMatrix.html

docs/reference/circlize-package.html

docs/reference/circlize.html

docs/reference/circos.arrow-1.png

docs/reference/circos.arrow-2.png

docs/reference/circos.arrow.html

docs/reference/circos.axis-1.png

docs/reference/circos.axis.html

docs/reference/circos.barplot-1.png

docs/reference/circos.barplot-2.png

docs/reference/circos.barplot.html

docs/reference/circos.boxplot-1.png

docs/reference/circos.boxplot-2.png

docs/reference/circos.boxplot.html

docs/reference/circos.clear.html

docs/reference/circos.dendrogram-1.png

docs/reference/circos.dendrogram.html

docs/reference/circos.genomicAxis-1.png

docs/reference/circos.genomicAxis.html

docs/reference/circos.genomicDensity-1.png

docs/reference/circos.genomicDensity-2.png

docs/reference/circos.genomicDensity.html

docs/reference/circos.genomicHeatmap-1.png

docs/reference/circos.genomicHeatmap.html

docs/reference/circos.genomicIdeogram-1.png

docs/reference/circos.genomicIdeogram.html

docs/reference/circos.genomicInitialize-1.png

docs/reference/circos.genomicInitialize-2.png

docs/reference/circos.genomicInitialize-3.png

docs/reference/circos.genomicInitialize-4.png

docs/reference/circos.genomicInitialize-5.png

docs/reference/circos.genomicInitialize-6.png

docs/reference/circos.genomicInitialize-7.png

docs/reference/circos.genomicInitialize-8.png

docs/reference/circos.genomicInitialize.html

docs/reference/circos.genomicLabels-1.png

docs/reference/circos.genomicLabels-2.png

docs/reference/circos.genomicLabels.html

docs/reference/circos.genomicLines-1.png

docs/reference/circos.genomicLines.html

docs/reference/circos.genomicLink-1.png

docs/reference/circos.genomicLink.html

docs/reference/circos.genomicPoints-1.png

docs/reference/circos.genomicPoints.html

docs/reference/circos.genomicPosTransformLines.html

docs/reference/circos.genomicRainfall-1.png

docs/reference/circos.genomicRainfall.html

docs/reference/circos.genomicRect-1.png

docs/reference/circos.genomicRect-2.png

docs/reference/circos.genomicRect.html

docs/reference/circos.genomicText-1.png

docs/reference/circos.genomicText.html

docs/reference/circos.genomicTrack.html

docs/reference/circos.genomicTrackPlotRegion.html

docs/reference/circos.heatmap-1.png

docs/reference/circos.heatmap.html

docs/reference/circos.heatmap.initialize.html

docs/reference/circos.heatmap.link-1.png

docs/reference/circos.heatmap.link-2.png

docs/reference/circos.heatmap.link.html

docs/reference/circos.info.html

docs/reference/circos.initialize.html

docs/reference/circos.initializeWithIdeogram-1.png

docs/reference/circos.initializeWithIdeogram-10.png

docs/reference/circos.initializeWithIdeogram-2.png

docs/reference/circos.initializeWithIdeogram-3.png

docs/reference/circos.initializeWithIdeogram-4.png

docs/reference/circos.initializeWithIdeogram-5.png

docs/reference/circos.initializeWithIdeogram-6.png

docs/reference/circos.initializeWithIdeogram-7.png

docs/reference/circos.initializeWithIdeogram-8.png

docs/reference/circos.initializeWithIdeogram-9.png

docs/reference/circos.initializeWithIdeogram.html

docs/reference/circos.lines-1.png

docs/reference/circos.lines.html

docs/reference/circos.link.html

docs/reference/circos.nested.html

docs/reference/circos.par.html

docs/reference/circos.points-1.png

docs/reference/circos.points.html

docs/reference/circos.polygon-1.png

docs/reference/circos.polygon.html

docs/reference/circos.raster-1.png

docs/reference/circos.raster.html

docs/reference/circos.rect-1.png

docs/reference/circos.rect.html

docs/reference/circos.segments-1.png

docs/reference/circos.segments.html

docs/reference/circos.text-1.png

docs/reference/circos.text.html

docs/reference/circos.track.html

docs/reference/circos.trackHist-1.png

docs/reference/circos.trackHist.html

docs/reference/circos.trackLines.html

docs/reference/circos.trackPlotRegion-1.png

docs/reference/circos.trackPlotRegion.html

docs/reference/circos.trackPoints-1.png

docs/reference/circos.trackPoints.html

docs/reference/circos.trackText.html

docs/reference/circos.triangle-1.png

docs/reference/circos.triangle.html

docs/reference/circos.update.html

docs/reference/circos.updatePlotRegion-1.png

docs/reference/circos.updatePlotRegion.html

docs/reference/circos.violin-1.png

docs/reference/circos.violin-2.png

docs/reference/circos.violin.html

docs/reference/circos.xaxis.html

docs/reference/circos.yaxis-1.png

docs/reference/circos.yaxis.html

docs/reference/cm_h.html

docs/reference/cm_x.html

docs/reference/cm_y.html

docs/reference/col2value.html

docs/reference/colorRamp2.html

docs/reference/convert_height.html

docs/reference/convert_length-1.png

docs/reference/convert_length.html

docs/reference/convert_x-1.png

docs/reference/convert_x.html

docs/reference/convert_y.html

docs/reference/cytoband.col.html

docs/reference/degree.html

docs/reference/draw.sector-1.png

docs/reference/draw.sector-2.png

docs/reference/draw.sector.html

docs/reference/fontsize.html

docs/reference/generateRandomBed.html

docs/reference/genomicDensity.html

docs/reference/get.all.sector.index.html

docs/reference/get.all.track.index.html

docs/reference/get.cell.meta.data-1.png

docs/reference/get.cell.meta.data.html

docs/reference/get.current.chromosome.html

docs/reference/get.current.sector.index.html

docs/reference/get.current.track.index.html

docs/reference/getI.html

docs/reference/highlight.chromosome.html

docs/reference/highlight.sector-1.png

docs/reference/highlight.sector.html

docs/reference/inch_h.html

docs/reference/inch_x.html

docs/reference/inch_y.html

docs/reference/inches_h.html

docs/reference/inches_x.html

docs/reference/inches_y.html

docs/reference/index.html

docs/reference/mm_h.html

docs/reference/mm_x.html

docs/reference/mm_y.html

docs/reference/names.CELL_META.html

docs/reference/posTransform.default.html

docs/reference/posTransform.text.html

docs/reference/print.CELL_META.html

docs/reference/rainfallTransform.html

docs/reference/rand_color-1.png

docs/reference/rand_color.html

docs/reference/read.chromInfo.html

docs/reference/read.cytoband.html

docs/reference/reverse.circlize.html

docs/reference/set.current.cell.html

docs/reference/set_track_gap-1.png

docs/reference/set_track_gap.html

docs/reference/show.index.html

docs/reference/smartAlign.html

docs/reference/uh.html

docs/reference/ux.html

docs/reference/uy.html

example/doodle.pdf

inst/CITATION

inst/extdata/DMR.RData

inst/extdata/Rlogo.png

inst/extdata/bird.orders.RData

inst/extdata/chromInfo.txt

inst/extdata/chrom_info_list.rds

inst/extdata/cytoBand.txt

inst/extdata/cytoband_list.rds

inst/extdata/doodle.RData

inst/extdata/download_and_slice_doodle.R inst/extdata/download_ucsc.R

inst/extdata/tagments_WGBS_DMR.RData

inst/extdata/tp_family.RData

inst/extdata/tp_family_df.rds

test/10.test.arc.points.R

test/11.test_circos.trackPlotRegion.R test/12.test_circos.points.R test/13.test_circos.lines.R test/14.test_circos.text.R test/15.test_circos.rect.R

test/16.test_circos.polygon.R

test/17.test_circos.axis.R test/18.test_circos.link.R test/19.test.circos.trackHist.R test/20.test_draw.sector.R

test/21.test_get.cell.meta.data.R

jokergoo/circlize documentation built on Nov. 17, 2023, 11:32 a.m.

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jokergoo/circlize
Circular Visualization

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Circular Visualization

Files in jokergoo/circlize
Circular Visualization