get_classes-ConsensusPartition-method: Get subgroup labels

In jokergoo/cola: A Framework for Consensus Partitioning

Get subgroup labels

Description

Get subgroup labels

Usage

## S4 method for signature 'ConsensusPartition'
get_classes(object, k = object@k)

Arguments

object	A ConsensusPartition-class object.
k	Number of subgroups.

Value

A data frame with subgroup labels and other columns which are entropy of the percent membership matrix and the silhouette scores which measure the stability of a sample to stay in its group.

If k is not specified, it returns a data frame with subgroup labels from all k.

Author(s)

Zuguang Gu <[e-mail]>

Examples

data(golub_cola)
obj = golub_cola["ATC", "skmeans"]
get_classes(obj, k = 2)
get_classes(obj)

jokergoo/cola documentation built on Feb. 29, 2024, 1:41 a.m.