get_consensus-ConsensusPartition-method: Get consensus matrix
In jokergoo/cola: A Framework for Consensus Partitioning
get_consensus-ConsensusPartition-method R Documentation
Get consensus matrix
Description
Get consensus matrix
Usage
## S4 method for signature 'ConsensusPartition'
get_consensus(object, k)
Arguments
object
A ConsensusPartition-class object.
k
Number of subgroups.
Details
For row i and column j in the consensus matrix, the value of corresponding x_ij
is the probability of sample i and sample j being in the same group from all partitions.
Value
A consensus matrix corresponding to the current k.
Author(s)
Zuguang Gu <z.gu@dkfz.de>
Examples
data(golub_cola)
obj = golub_cola["ATC", "skmeans"]
get_consensus(obj, k = 2)
jokergoo/cola documentation built on Feb. 29, 2024, 1:41 a.m.
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| get_consensus-ConsensusPartition-method | R Documentation |
Get consensus matrix
Description
Get consensus matrix
Usage
## S4 method for signature 'ConsensusPartition'
get_consensus(object, k)
Arguments
object |
A |
k |
Number of subgroups. |
Details
For row i and column j in the consensus matrix, the value of corresponding x_ij is the probability of sample i and sample j being in the same group from all partitions.
Value
A consensus matrix corresponding to the current k.
Author(s)
Zuguang Gu <z.gu@dkfz.de>
Examples
data(golub_cola)
obj = golub_cola["ATC", "skmeans"]
get_consensus(obj, k = 2)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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