get_membership-ConsensusPartitionList-method: Get membership matrix

Description Usage Arguments Details Value Author(s) Examples

Description

Get membership matrix

Usage

1
2
## S4 method for signature 'ConsensusPartitionList'
get_membership(object, k)

Arguments

object

a ConsensusPartitionList-class object.

k

number of partitions.

Details

The membership matrix (the probability of each sample to be in a subgroup) is inferred from the membership matrices of all combinations of methods, weighted by the mean silhouette score of the partitions for each method. So methods which give instable partitions have lower weights when summarizing membership matrix from all methods.

Value

A membership matrix where rows correspond to the samples in the original matrix.

Author(s)

Zuguang Gu <[email protected]>

Examples

1
2

jokergoo/cola documentation built on June 27, 2018, 10:35 a.m.