test_to_known_factors-HierarchicalPartition-method: Test correspondance between predicted and known classes

Description Usage Arguments Details Value Author(s) Examples

Description

Test correspondance between predicted and known classes

Usage

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## S4 method for signature 'HierarchicalPartition'
test_to_known_factors(object, depth = max_depth(object),
    known = get_anno(object[1]))

Arguments

object

a HierarchicalPartition-class object.

depth

minimal depth of the hierarchy

known

a vector or a data frame with known factors

Details

The function test correlation between classes and known annotations at each node in the hierarchy.

Value

A matrix of p-values.

Author(s)

Zuguang Gu <[email protected]>

Examples

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# There is no example
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jokergoo/cola documentation built on Nov. 19, 2018, 9:18 p.m.