BackwardLinear: Autoregressive Backward Algorithm adapted from Stanculescu et...

In jordanaron22/AndalusiaAlgae: Autoregressive Bivariate HMM for Algae and Toxin Data

Autoregressive Backward Algorithm adapted from Stanculescu et al

Description

Calculates backward probabilities accounting for autoregressive dependence in the toxin measurements

Usage

BackwardLinear(
  algae_data,
  toxin_data,
  time,
  tran,
  mu_a,
  k_a,
  tox_em,
  states,
  toxin_states
)

Arguments

algae_data	Algae count data
toxin_data	Toxin data measured in micro grams / OA equivalent
time	Day to calculate forward probability at
tran	Transition Markov state probabilities
mu_a	mean negative binomial parameter
k_a	size negative binomial parameter
tox_em	Classification matrix from ordinal regression parameters

Value

Return backward probabilities from day time to end of data

jordanaron22/AndalusiaAlgae documentation built on Feb. 18, 2025, 3:59 p.m.