CalcBetas: Calculates ordinal logistic regression parameters

In jordanaron22/AndalusiaAlgae: Autoregressive Bivariate HMM for Algae and Toxin Data

Calculates ordinal logistic regression parameters

Description

Calculates ordinal logistic regression parameters

Usage

CalcBetas(
  algae_data,
  toxin_data,
  forw,
  backw,
  tran,
  mu_a,
  k,
  tox_em,
  denom,
  states,
  toxin_states
)

Arguments

algae_data	Algae count data
toxin_data	Toxin data measured in micro grams / OA equivalent
forw	Forward probabilities
backw	Backward probabilities
tran	Old Markov state transition probabilities
mu_a	mean negative binomial parameter
k	size negative binomial parameter
tox_em	Classification matrix from ordinal regression parameters
denom	Denominator used in expected value calculations, total likelihood of all data

Value

Returns betas for ordinal logistic regression

jordanaron22/AndalusiaAlgae documentation built on Feb. 18, 2025, 3:59 p.m.