Files in joshwlambert/DAISIEsim

R/DAISIE_ONEcolonist_nonoceanic.R R/DAISIE_ONEcolonist_oceanic.R R/DAISIE_area_params.R R/DAISIE_create_island_nonoceanic.R R/DAISIE_create_island_oceanic.R R/DAISIE_extract_stt_median.R R/DAISIE_format_CS_nonoceanic.R R/DAISIE_format_CS_oceanic.R R/DAISIE_format_IW_nonoceanic.R R/DAISIE_format_IW_oceanic.R R/DAISIE_half_life.R R/DAISIE_nonoceanic_spec.R R/DAISIE_plot_sims.R R/DAISIE_plot_stt.R R/DAISIE_rates.R R/DAISIE_sample_event.R R/DAISIE_sim.R R/DAISIE_sim_core.R R/DAISIE_sim_core_1_4.R R/DAISIE_sim_update_state.R R/DAISIE_sim_with_mainland.R R/DAISIE_utils.R R/are_rates.R R/create_rates.R README.md man/DAISIE_ONEcolonist.Rd man/DAISIE_avg_half_life.Rd man/DAISIE_calc_clade_ana_rate.Rd man/DAISIE_calc_clade_clado_rate.Rd man/DAISIE_calc_clade_ext_rate.Rd man/DAISIE_calc_clade_imm_rate.Rd man/DAISIE_create_island_oceanic.Rd man/DAISIE_extract_stt_median.Rd man/DAISIE_format_CS_nonoceanic.Rd man/DAISIE_format_CS_oceanic.Rd man/DAISIE_half_life.Rd man/DAISIE_plot_sims.Rd man/DAISIE_plot_stt.Rd man/DAISIE_sample_event.Rd man/DAISIE_sim.Rd man/DAISIE_sim_avg_half_life.Rd man/DAISIE_sim_core_1_4.Rd man/DAISIE_sim_core_checked_1_4.Rd man/DAISIE_sim_half_life.Rd man/DAISIE_sim_update_state.Rd man/DAISIE_sim_with_mainland.Rd man/are_area_params.Rd man/are_rates.Rd man/calc_next_timeval.Rd man/create_area_params.Rd man/create_rates.Rd man/get_ana_rate.Rd man/get_clado_rate.Rd man/get_ext_rate.Rd man/get_immig_rate.Rd man/get_t_hor.Rd man/is_numeric_list.Rd man/island_area.Rd man/translate_island_ontogeny.Rd man/translate_sea_level.Rd man/update_rates.Rd tests/testthat.R tests/testthat/Rplots.pdf tests/testthat/test-are_area_params.R tests/testthat/test-are_rates.R tests/testthat/test-create_area_params.R tests/testthat/test-create_rate.R tests/testthat/test-daisie_calc_clade_ana_rate.R tests/testthat/test-daisie_calc_clade_clado_rate.R tests/testthat/test-daisie_calc_clade_ext_rate.R tests/testthat/test-daisie_calc_clade_imm_rate.R tests/testthat/test-daisie_ext_test.R tests/testthat/test-daisie_extract_stt_median.R tests/testthat/test-daisie_onecolonist.R tests/testthat/test-daisie_plot_sims.R tests/testthat/test-daisie_plot_stt.R tests/testthat/test-daisie_sim.R tests/testthat/test-daisie_sim_core.R tests/testthat/test-daisie_sim_core_1_4.R tests/testthat/test-daisie_sim_core_checked.R tests/testthat/test-daisie_sim_with_mainland.R tests/testthat/test-ddd_sample2.R tests/testthat/test-get_clado_rate.R tests/testthat/test-get_ext_rate.R tests/testthat/test-get_immig_rate.R tests/testthat/test-get_thor.R tests/testthat/test-is_numeric_list.R tests/testthat/test-island_area.R tests/testthat/test-update_rates.R vignettes/demo.Rmd