DAISIE_plot_stt: Create the Species-Through-Time plot. This is used to...

In joshwlambert/DAISIEsim:

Description

Create the Species-Through-Time plot. This is used to visualize the output of DAISIE_sim

Usage

DAISIE_plot_stt(plot_plus_one = FALSE, time, stt_q0.025_all,
  stt_q0.25_all, stt_average_all, stt_q0.75_all, stt_q0.975_all)

Arguments

plot_plus_one	Boolean to indicate to plot all values plus one. Set to TRUE for default behavior. Set to FALSE to plot all values without adding one. Only works when there is one type of species
time	the time span simulated
stt_q0.025_all	STT 2.5% quantile. Must be a data frame with columns name Time, nI, Endemic and Total
stt_q0.25_all	STT 25% quantile Must be a data frame with columns name Time, nI, Endemic and Total
stt_average_all	STT average Must be a data frame with columns name Time, nI, Endemic and Total
stt_q0.75_all	STT 75% quantile Must be a data frame with columns name Time, nI, Endemic and Total
stt_q0.975_all	STT 97.5% quantile Must be a data frame with columns name Time, nI, Endemic and Total

joshwlambert/DAISIEsim documentation built on June 5, 2019, 7:58 a.m.