jr-leary7/SCISSORS: Identify cell subpopulations in single cell RNA-seq data

SCISSORS enables easy & robust identification of cell subtypes and other subpopulations in scRNA-seq data. The method leverages a cosine-distance based silhouette score that is calculated for each cell and indicates goodness of fit. Several different sets of parameters are tried, and the combination that maximizes this metric is considered optimal.

Getting started

Package details

Maintainer
LicenseMIT + file LICENSE
Version1.2.0
URL https://github.com/jr-leary7/SCISSORS
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("jr-leary7/SCISSORS")
jr-leary7/SCISSORS documentation built on April 20, 2023, 8:21 p.m.