API for jrboyd/dthic
HiC analysis using data.table
| Global functions | |
|---|---|
| HiC_matrix | Man page Source code |
| HiC_matrix.from_hic | Man page Source code |
| HiC_matrix_wDirectionality | Man page |
| HiC_matrix_wInsulation | Man page |
| HiC_parameters | Man page Source code |
| add_arch_plot | Man page |
| add_matrix_plot | Man page |
| apply_diagonal_zscore | Man page |
| calc_delta_for_hic | Source code |
| compare_tadness | Source code |
| compare_tadness.plot_prep | Source code |
| decrease_resolution | Man page |
| directionality_of_chrRange | Source code |
| directionality_of_index | Man page Source code |
| directionality_of_indexes | Source code |
| directionality_range | Source code |
| dt2mat | Man page |
| equal_breaks | Source code |
| fetchBigInteract | Man page Source code |
| fetch_hic | Source code Source code |
| fetch_hic_byGRanges | Man page |
| find_maxima_minima | Source code |
| ggplotList2grobList | Source code |
| ggplot_hic_delta | Source code |
| ggplot_hic_delta.df | Source code |
| ggplot_ref | Man page Source code |
| hello | Man page |
| hic_equal_breaks | Source code |
| insulation_of_chrRange | Source code |
| insulation_of_index | Source code |
| insulation_of_indexes | Source code |
| insulation_range | Source code |
| labels | Source code |
| mat2dt | Man page |
| plot_combined_hic | Man page Source code |
| plot_fmm_res | Source code |
| plot_upperMatrix | Man page Source code |
| plot_upperMatrix_with_insulation | Man page Source code |
| score_minima | Source code |
| score_tadness | Source code |
| subset_dt | Man page Source code |
| sync_height | Man page |
| sync_width | Man page |
| writeBigInteract_hicpro | Man page |
| writeBigInteract_ibed | Man page Source code |
