fetch_hic_byGRanges: fetch_hic_byGRanges

Description Usage Arguments Value

View source: R/functions_matrix_helpers.R

Description

Retrieves rectangular region of a HiC_matrix.

Usage

1
fetch_hic_byGRanges(hic_mat, gr1, gr2 = gr1, ext = 0)

Arguments

hic_mat

a valid HiC_matrix object

gr1

GRanges, specifies range of i indexes

gr2

Granges, specifies range of j indexes, default is same as gr1

ext

integer, extends gr1 and gr2 by set amount, default is 0

Value

data.table correspoding to gr1xgr2 region of hic_mat


jrboyd/dthic documentation built on July 20, 2018, 4:22 a.m.