fetch_hic_byGRanges: fetch_hic_byGRanges
In jrboyd/dthic: HiC analysis using data.table
fetch_hic_byGRanges R Documentation
fetch_hic_byGRanges
Description
Retrieves rectangular region of a HiC_matrix.
Usage
fetch_hic_byGRanges(hic_mat, gr1, gr2 = gr1, ext = 0)
Arguments
hic_mat
a valid HiC_matrix object
gr1
GRanges, specifies range of i indexes
gr2
Granges, specifies range of j indexes, default is same as gr1
ext
integer, extends gr1 and gr2 by set amount, default is 0
Value
data.table correspoding to gr1xgr2 region of hic_mat
jrboyd/dthic documentation built on Oct. 4, 2022, 8:53 p.m.
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| fetch_hic_byGRanges | R Documentation |
fetch_hic_byGRanges
Description
Retrieves rectangular region of a HiC_matrix.
Usage
fetch_hic_byGRanges(hic_mat, gr1, gr2 = gr1, ext = 0)
Arguments
hic_mat |
a valid HiC_matrix object |
gr1 |
GRanges, specifies range of i indexes |
gr2 |
Granges, specifies range of j indexes, default is same as gr1 |
ext |
integer, extends gr1 and gr2 by set amount, default is 0 |
Value
data.table correspoding to gr1xgr2 region of hic_mat
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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