findNonOverlappingMotifs: Finds all CG, GC and long GCGC stretches in DNAStringSet
In jsemple19/nanodsmf: Analyse nanopore dual enzyme single molecule footprinting data (nanoDSMF)
Description
Usage
Arguments
Value
Examples
Description
Finds all CG, GC and long GCGC stretches in DNAStringSet
Usage
1
findNonOverlappingMotifs(DNAss)
Arguments
DNAss
A DNAStringSet object
Value
A list of three genomic ranges for isolated CGs, isolated GCs, and CG/GC/GCG/CGC from longer runs
Examples
1
findNonOverlappingMotifs(DNAss)
jsemple19/nanodsmf documentation built on July 23, 2020, 7:40 a.m.
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Description Usage Arguments Value Examples
Description
Finds all CG, GC and long GCGC stretches in DNAStringSet
Usage
1 | findNonOverlappingMotifs(DNAss)
|
Arguments
DNAss |
A DNAStringSet object |
Value
A list of three genomic ranges for isolated CGs, isolated GCs, and CG/GC/GCG/CGC from longer runs
Examples
1 | findNonOverlappingMotifs(DNAss)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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