mIdxToGR: Convert MIndex object to Genomic Ranges object
In jsemple19/nanodsmf: Analyse nanopore dual enzyme single molecule footprinting data (nanoDSMF)
Description
Usage
Arguments
Value
Examples
Description
Function to convert Mindex object (obtained by matching patterns on DNAstringset) to genomic ranges
Usage
1
mIdxToGR(mIdx)
Arguments
mIdx
A MIndex object
Value
A GenomicRanges object
Examples
1
mIdxToGR(Biostrings::vmatchPattern("ATTTAGGGTTTTAGAATACTGCCATTAATTAAAAAT",ttTi5605dna))
jsemple19/nanodsmf documentation built on July 23, 2020, 7:40 a.m.
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Description Usage Arguments Value Examples
Description
Function to convert Mindex object (obtained by matching patterns on DNAstringset) to genomic ranges
Usage
1 | mIdxToGR(mIdx)
|
Arguments
mIdx |
A MIndex object |
Value
A GenomicRanges object
Examples
1 | mIdxToGR(Biostrings::vmatchPattern("ATTTAGGGTTTTAGAATACTGCCATTAATTAAAAAT",ttTi5605dna))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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