splitMotifs: Split sequences with multiple motifs
In jsemple19/nanodsmf: Analyse nanopore dual enzyme single molecule footprinting data (nanoDSMF)
Description
Usage
Arguments
Value
Examples
View source: R/nanoSingleMolecule.R
Description
Split sequences with multiple motifs
Usage
1
splitMotifs(tsv, motif)
Arguments
tsv
A tab serparated values text file with results from Nanopore CpG or GpC methylation calls
motif
The motif to search for: "CG" or "GC".
Value
A tsv with all mutli-motif sequences split into individual motifs with normalised log_lik_ratio
Examples
1
splitMotifs(MSssI_CpG,"CG")
jsemple19/nanodsmf documentation built on July 23, 2020, 7:40 a.m.
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Description Usage Arguments Value Examples
View source: R/nanoSingleMolecule.R
Description
Split sequences with multiple motifs
Usage
1 | splitMotifs(tsv, motif)
|
Arguments
tsv |
A tab serparated values text file with results from Nanopore CpG or GpC methylation calls |
motif |
The motif to search for: "CG" or "GC". |
Value
A tsv with all mutli-motif sequences split into individual motifs with normalised log_lik_ratio
Examples
1 | splitMotifs(MSssI_CpG,"CG")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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