Man pages for jsigao/prioritree
A utility for improving phylodynamic analyses in BEAST
| description_deltaprior | Generate the description for the prior specification on the... |
| description_muprior | Generate the description for the prior specification on the... |
| draw_nevents_conditional | Draw the number of events conditioning on the start and end... |
| fill_DTMCmats | Compute the uniformized matrix (R) of Q and its... |
| historySimulator_teststatisticsComputer | Simulate discrete-character histories using the inferred... |
| sim_history | Simulate history of discrete-character changes over a... |
| sim_history_branch_conditional | Simulate history of discrete-character changes over a branch... |
| sim_history_conditional | Simulate history of discrete-character changes over a... |
| sim_history_piece_conditional | Simulate history of discrete-character changes over a... |
| sim_history_unconditional | Simulate history of discrete-character changes over a... |
| tex_analysis | Combine the descriptions on different types of analyses to... |
| tex_bayesianinference | Generate the description (in the selected format) of the... |
| tex_data | Generate the description (in the selected format) of the data... |
| tex_dcanalysis | Generate the description (in the selected format) of the MCMC... |
| tex_deltaprior | Generate the description (in the selected format) of the... |
| tex_model | Generate the description (in the selected format) of the... |
| tex_muprior | Generate the description (in the selected format) of the... |
| tex_posterioranalysis | Generate the description (in the selected format) of the MCMC... |
| tex_powerposterior | Generate the description (in the selected format) of the... |
| tex_prior | Combine the descriptions on the two priors to generate the... |
| tex_prioranalysis | Generate the description (in the selected format) of MCMC... |
| tex_summarystats | Generate the description (in the selected format) of the... |
| xml_clockratemodel | Generate the average dispersal rate model block in a 'BEAST'... |
| xml_discretetraitdata | Generate the data block in a BEAST XML file. |
| xml_discretetraitmodel | Generate the discrete-geography model block in a BEAST XML... |
| xml_monitors | Generate the monitor block in a 'BEAST' XML file. |
| xml_phyloctmc | Generate the treeLikelihood block in a 'BEAST' XML file. |
| xml_treemodel | Generate the tree-model block in a 'BEAST' XML file. |
