tex_posterioranalysis: Generate the description (in the selected format) of the MCMC...

In jsigao/prioritree: A utility for improving phylodynamic analyses in BEAST

Generate the description (in the selected format) of the MCMC simulation inferring the posterior distribution.

Description

Generate the description (in the selected format) of the MCMC simulation inferring the posterior distribution.

Usage

tex_posterioranalysis(
  mcmc_chainlength = 1,
  mcmc_samplingfreq = 1,
  mcmc_numreplicates = 2,
  format = c("HTML", "Latex", "Markdown")
)

Arguments

mcmc_chainlength	Number of MCMC generations to run the analysis
mcmc_samplingfreq	Every number of MCMC generations to log to the output
mcmc_numreplicates	Number of MCMC replicates to run
format	One of "HTML", "Latex", or "Markdown".

Value

a paragraph (in the selected format) describing the MCMC simulation inferring the posterior distribution.

Examples

tex_posterioranalysis(1000000, 1000, 2)

jsigao/prioritree documentation built on Jan. 9, 2023, 5:35 a.m.