Man pages for jsta/glatos
A package for the Great Lakes Acoustic Telemetry Observation System
| abacus_plot | Plot detection locations of acoustic transmitters over time |
| adjust_playback_time | Modify playback time of video |
| aggregate_total_no_overlap | The function below aggregates timedelta of first_detection... |
| aggregate_total_with_overlap | The function below aggregates timedelta of first_detection... |
| calc_collision_prob | Estimate probability of collision for telemetry transmitters |
| check_dependencies | Check system dependencies necessary for package 'glatos' |
| convert_glatos_to_att | Convert detections and receiver metadata to a format that ATT... |
| convert_otn_erddap_to_att | Convert detections, transmitter, receiver, and animal... |
| crw | Simulate a correlated random walk |
| crw_in_polygon | Simulate a correlated random walk inside a polygon |
| detection_bubble_plot | Plot number of tagged animals or detections on a map |
| detection_events | Classify discrete events in detection data |
| detect_transmissions | Simulate detection of transmitter signals in a receiver... |
| false_detections | False detection filter |
| get_days | Determines which calculation method to use for the residency... |
| glatos | An R package for the Great Lakes Acoustic Telemetry... |
| glatos_animals | Constructor function for the class glatos_animals |
| glatos_detections | Constructor function for the class glatos_detections |
| glatos_receivers | Constructor function for the class glatos_receivers |
| glatos_workbook | Constructor function for the class glatos_workbook |
| greatLakesPoly | A SpatialPolygonDataFrame with Great Lakes coastline and some... |
| greatLakesTrLayer | A TransitionLayer object that only allows transitions to... |
| install_ffmpeg | Install external FFmpeg software into 'glatos' package |
| interpolate_path | Interpolate new positions within a spatiotemporal path data |
| interval_count | The function below takes a detection events data frame and... |
| kml_to_csv | KML To CSV Conversion |
| kml_workbook | Make a KML or KMZ file of receiver and animal release... |
| lamprey_tracks | Sea Lamprey positions from Lake George, St. Marys River, 2012 |
| make_frames | Create an animated video of spatiotemporal path data |
| make_transition | Create transition layer from polygon shapefile |
| make_transition2 | Create transition layer from a spatial polygon |
| make_transition3 | Create transition layer from polygon shapefile |
| make_video | Create video from sequence of still images |
| min_lag | Calculate 'min_lag' for identifying potential false positive... |
| otn_aat_animals | Example animal data from the OTN ERDDAP |
| otn_aat_receivers | Example station data from the OTN ERDDAP |
| otn_aat_tag_releases | Example tag release data from the OTN ERDDAP |
| point_offset | Identify new location based on distance and bearing from... |
| position_heat_map | Position Heat Maps |
| range_detection | Detection range data set |
| raw_lamprey_workbook | Raw GLATOS Workbook from St. Marys River Sea Lamprey project |
| raw_walleye_detections | Zipped GLATOS detection file from Huron Erie Corridor Walleye... |
| read_glatos_detections | Read data from a GLATOS detection file |
| read_glatos_receivers | Read data from a GLATOS receiver location file |
| read_glatos_workbook | Read data from a GLATOS project workbook |
| read_otn_deployments | Read data from a OTN detection file |
| read_otn_detections | Read data from a OTN detection file |
| read_vemco_tag_specs | Read telemetry transmitter (tag) specification data from a... |
| real_sensor_values | Add 'real'-scale sensor values to glatos detetections |
| receiver_line_det_sim | Simulate detection of acoustic-tagged fish crossing a... |
| REI | Calculates a returns a list of each station and the REI... |
| residence_index | Generate the residence index from a set of detections |
| rotate_points | Rotate points in a 2-d plane |
| shoreline | zipped polygon shapefile of Great Lakes |
| summarize_detections | Summarize detections by animal, location, or both |
| total_diff_days | The function below determines the total days difference. |
| transmit_along_path | Simulate telemetry transmitter signals along a path |
| vector_heading | Calculate direction (heading) of a vector (in degrees) |
| video-images | Video frames of walleye movements in Lake Huron |
| vrl2csv | Convert Vemco VRL file(s) to CSV format (detection data only) |
