Man pages for juliancandia/eNetXplorer
Quantitative Exploration of Elastic Net Families for Generalized Linear Models
| breastCancerSurv | gene signature for breast cancer survival |
| eNetXplorer | generates family of elastic net models for different alphas |
| eNetXplorer-internal | Internal eNetXplorer functions |
| eNetXplorer-package | explores elastic net families for generalized linear models |
| export | generates plain text files from eNetXplorer object |
| H1N1_Flow | longitudinal cell population frequencies and titer response... |
| Leukemia_miR | microRNA expression of acute leukemia phenotypes |
| Leuk_miR_filt | microRNA expression of acute leukemia phenotypes (filtered... |
| Leuk_miR_full | microRNA expression of acute leukemia phenotypes (full... |
| mergeObj | merges eNetXplorer objects with different alphas |
| plotContingency | generates plot of response vs out-of-bag predictions across... |
| plot.eNetXplorer | generates plots from eNetXplorer object |
| plotFeatureCaterpillar | generates caterpillar plot of feature statistics |
| plotFeatureHeatmap | generates heatmap plot of feature statistics |
| plotKaplanMeier | generates Kaplan-Meier plot of survival probability as a... |
| plotLambdaVsQF | generates plot of quality function across 'lambda' |
| plotMeasuredVsOOB | generates plot of response vs out-of-bag predictions across... |
| plotSummary | generates summary plots of model performance across alpha |
| plotSurvROC | generates time-dependent ROC plots from Cox predicted risks |
| QuickStartEx | synthetic dataset |
| summary.eNetXplorer | generates list of model statistics |
| summaryPDF | generates PDF report with summary of main results |
