ref_compTable: Average reference profiles over each cell type
In jysonganan/methylDeConv: Computational pipeline for deconvolution of methylation data.
View source: R/refCompTableProbeSelection.R
ref_compTable R Documentation
Average reference profiles over each cell type
Description
Compute the average reference profiles for each cell type, using the reference matrix of purified samples
from different cell types (phenotype).
Usage
ref_compTable(ref_betamatrix, ref_phenotype)
Arguments
ref_betamatrix
The reference matrix ref_betamatrix.
ref_phenotype
The cell type information for the reference matrix.
Value
The data maxtirx of average reference profiles (each column corresponds to each cell type),
except for the first column (Fstat) and the last three columns (low, high, range) which are the summary statistics.
jysonganan/methylDeConv documentation built on Aug. 8, 2022, 6:25 a.m.
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View source: R/refCompTableProbeSelection.R
| ref_compTable | R Documentation |
Average reference profiles over each cell type
Description
Compute the average reference profiles for each cell type, using the reference matrix of purified samples from different cell types (phenotype).
Usage
ref_compTable(ref_betamatrix, ref_phenotype)
Arguments
ref_betamatrix |
The reference matrix ref_betamatrix. |
ref_phenotype |
The cell type information for the reference matrix. |
Value
The data maxtirx of average reference profiles (each column corresponds to each cell type), except for the first column (Fstat) and the last three columns (low, high, range) which are the summary statistics.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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