ref_probe_selection_multiclassRF_cv: Multi-class RF modeling feature selection

In jysonganan/methylDeConv: Computational pipeline for deconvolution of methylation data.

Multi-class RF modeling feature selection

Description

Select features based on multi-class Random Forest modeling on the reference matrix of all probes.

Usage

ref_probe_selection_multiclassRF_cv(
  ref_betamatrix,
  ref_phenotype,
  nCores = 4,
  reps.resamp = 5,
  reps.repeats = 3,
  tune_grid = 1:30
)

Arguments

ref_betamatrix	The reference matrix ref_betamatrix.
ref_phenotype	The cell type information for the reference matrix.

Value

A vector of the selected probes.

jysonganan/methylDeConv documentation built on Aug. 8, 2022, 6:25 a.m.