plot_tree: Plot Tree

In k-hench/GenomicOriginsScripts: Provides the R scripts for the paper "Ancestral variation, hybridization and modularity fuel a marine radiation"

Description

Plot Tree

Usage

plot_tree(
  tree,
  angle_in = 0,
  color = "red",
  higl_clade = TRUE,
  higl_node = NA,
  root_node = NA,
  rotate_root = FALSE,
  xlim = c(-2, 4.5),
  support_guide = FALSE,
  open_angle = 180
)

Arguments

tree	tree object
angle_in	numeric, tree opening angle
color	string, highlight color
higl_clade	logical, should there be highlighting
higl_node	node, where to start highlighting
root_node	node, where to rotate the tree
rotate_root	logical, should the tree be rotated
xlim	numeric vector, x limits
support_guide	logical, show legend for node support
open_angle	numeric, tree opening angle

k-hench/GenomicOriginsScripts documentation built on July 24, 2021, 3:05 p.m.